HMM Summary Page: TIGR04029

FunctionCMD domain protein, Avi_7170 family
Trusted Cutoff100.75
Domain Trusted Cutoff100.75
Noise Cutoff98.25
Domain Noise Cutoff98.25
Isology Typehypoth_equivalog_domain
HMM Length174
AuthorHaft DH
Entry DateJun 23 2010 10:54PM
Last ModifiedFeb 14 2011 3:27PM
CommentSequences in this family occur as the N-terminal domain of a fusion protein with a C-terminal peroxidase-like protein, or as discrete protein encoded next to a peroxidase-like protein. The two partners regularly are encoded near to, and in the same genomes as, a putative FMN-dependent luciferase-like monooxygenase (LLM) (TIGR04027), and an ABC transporter in which TIGR04028 models the substrate-binding protein. CDD identifies this family as falling within the CMD superfamily that includes carboxymuconolactone decarboxylase.
Genome PropertyGenProp0935: uptake/catabolism system KPN_01854/KPN_01858 (HMM)