HMM Summary Page: TIGR03954

Functionintegral membrane protein
Trusted Cutoff33.25
Domain Trusted Cutoff33.25
Noise Cutoff32.85
Domain Noise Cutoff32.85
Isology Typedomain
HMM Length85
AuthorHaft DH
Entry DateMar 11 2010 10:21AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM describes a strictly bacterial integral membrane domain of about 85 residues in length. It occurs in proteins that on rare occasions are fused to transporter domains such as the major facilitator superfamily domain. Of three invariant residues, two occur as a His-Gly dipeptide in the middle of three predicted transmembrane helices.