HMM Summary Page: TIGR03923

Functiontype VII secretion protein EccE
Gene SymboleccE
Trusted Cutoff108.00
Domain Trusted Cutoff108.00
Noise Cutoff42.15
Domain Noise Cutoff42.15
Isology Typeequivalog_domain
HMM Length344
AuthorHaft DH
Entry DateFeb 2 2010 11:06AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis model represents the transmembrane protein EccB of the actinobacterial flavor of type VII secretion systems. Species such as Mycobacterium tuberculosis have several instances of this system per genome, designated EccE1, EccE2, etc. This model represents a conserved core region, and many members have 200 or more additional C-terminal residues.
ReferencesRN [1] RM PMID:19876390 RT Systematic genetic nomenclature for type VII secretion systems. RA Bitter W, Houben EN, Bottai D, Brodin P, Brown EJ, Cox JS, Derbyshire K, Fortune SM, Gao LY, Liu J, Gey van Pittius NC, Pym AS, Rubin EJ, Sherman DR, Cole ST, Brosch R RL PLoS Pathog. 2009 Oct;5(10):e1000507. Epub 2009 Oct 30.
Genome PropertyGenProp0904: type VII secretion, Actinobacteria form (HMM)