HMM Summary Page: TIGR03902
| Accession | TIGR03902 |
| Name | rhom_GG_sort |
| Function | rhombosortase |
| Gene Symbol | rrtA |
| Trusted Cutoff | 84.00 |
| Domain Trusted Cutoff | 84.00 |
| Noise Cutoff | 78.00 |
| Domain Noise Cutoff | 78.00 |
| Isology Type | equivalog |
| EC Number | 3.4.21.- |
| HMM Length | 154 |
| Author | Haft DH |
| Entry Date | Dec 16 2009 10:02PM |
| Last Modified | Feb 10 2012 10:51AM |
| Comment | This model describes a rhomboid-like intramembrane serine protease. Its species distribution closely matches model TIGR03501, GlyGly-CTERM, which describes a protein targeting domain analogous to LPXTG and PEP-CTERM. In a number of species (Ralstonia eutropha ,R. metallidurans, R. solanacearum, Marinobacter aquaeolei, etc) with just one GlyGly-CTERM protein (i.e., a dedicated system), the rhombosortase and GlyGly-CTERM genes are adjacent. |
| References | DR PFAM; PF01694; peptidase, S54 (rhomboid) family RN [1] RM PMID:22194940 RT GlyGly-CTERM and rhombosortase: a C-terminal protein processing signal in a many-to-one pairing with a rhomboid family intramembrane serine protease. RA Haft DH, Varghese N RL PLoS One. 2011;6(12):e28886. |
| Genome Property | GenProp0778: protein sorting system, GlyGly-CTERM/rhombosortase (HMM) |