HMM Summary Page: TIGR03806

Functionconserved hypothetical protein, HNE_0200 family
Trusted Cutoff313.30
Domain Trusted Cutoff313.30
Noise Cutoff200.05
Domain Noise Cutoff200.05
Isology Typehypoth_equivalog_domain
HMM Length314
Mainrole CategoryHypothetical proteins
Subrole CategoryConserved
AuthorHaft DH
Entry DateAug 14 2009 12:41PM
Last ModifiedFeb 14 2011 3:27PM
CommentThe model TIGR03805 describes an uncharacterized protein family that contains repeats associated with the formation of a right-handed helical stack of parallel beta strands, homologous to those found in a number of carbohydrate-binding proteins and sugar hydrolases. This model describes another uncharacterized protein family, found in the same species as TIGR03805 member proteins, usually as the adjacent gene or in a fusion protein. An example is HNE_0200 from Hyphomonas neptunium ATCC 15444. Sometimes two members of this family are with a single member of TIGR03805. The function is unknown.