HMM Summary Page: TIGR03758

Functionintegrating conjugative element protein, PFL_4701 family
Trusted Cutoff42.70
Domain Trusted Cutoff42.70
Noise Cutoff30.15
Domain Noise Cutoff30.15
Isology Typehypoth_equivalog
HMM Length76
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryPlasmid functions
Gene Ontology TermGO:0003674: molecular_function molecular_function
GO:0005886: plasma membrane cellular_component
GO:0008150: biological_process biological_process
AuthorHaft DH
Entry DateMay 22 2009 8:58AM
Last ModifiedFeb 14 2011 3:27PM
CommentMembers of this family of small, hydrophobic proteins are found occasionally on plasmids such as the Pseudomonas putida TOL (toluene catabolic) plasmid pWWO_p085. Usually, however, they are found on the bacterial main chromosome in regions flanked by markers of conjugative transfer and/or transposition.
Genome PropertyGenProp0855: integrating conjugative element, PFGI-1 class (HMM)