HMM Summary Page: TIGR03754
Accession | TIGR03754 |
Name | conj_TOL_TraD |
Function | conjugative coupling factor TraD, PFGI-1 class |
Gene Symbol | traD |
Trusted Cutoff | 647.55 |
Domain Trusted Cutoff | 647.55 |
Noise Cutoff | 485.15 |
Domain Noise Cutoff | 485.15 |
Isology Type | equivalog |
HMM Length | 643 |
Author | Haft DH |
Entry Date | May 21 2009 12:18PM |
Last Modified | Feb 14 2011 3:27PM |
Comment | Members of this protein are assigned by homology to the TraD family of conjugative coupling factor. This particular clade serves as a marker for an extended gene region that occurs occasionally on plasmids, including the toluene catabolism TOL plasmid. More commonly, the gene region is chromosomal, flanked by various markers of conjugative transfer and insertion. |
Genome Property | GenProp0855: integrating conjugative element, PFGI-1 class (HMM) |