HMM Summary Page: TIGR03749

Functionintegrating conjugative element protein, PFL_4704 family
Trusted Cutoff138.80
Domain Trusted Cutoff138.80
Noise Cutoff102.25
Domain Noise Cutoff102.25
Isology Typehypoth_equivalog
HMM Length259
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryPlasmid functions
Gene Ontology TermGO:0003674: molecular_function molecular_function
GO:0005575: cellular_component cellular_component
GO:0008150: biological_process biological_process
AuthorHaft DH
Entry DateMay 20 2009 10:43AM
Last ModifiedFeb 14 2011 3:27PM
CommentMembers of this protein family are found occasionally on plasmids such as the Pseudomonas putida TOL plasmid pWWO_p085. Usually, however, they are found on the bacterial main chromosome in a region flanked by markers of conjugative transfer and/or transposition.
Genome PropertyGenProp0855: integrating conjugative element, PFGI-1 class (HMM)