HMM Summary Page: TIGR03739

FunctionPRTRC system protein D
Trusted Cutoff214.80
Domain Trusted Cutoff214.80
Noise Cutoff89.80
Domain Noise Cutoff89.80
Isology Typehypoth_equivalog
HMM Length320
AuthorHaft DH
Entry DateMay 8 2009 3:34PM
Last ModifiedFeb 14 2011 3:27PM
CommentA novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.
Genome PropertyGenProp0854: ParB-rel/ThiF-rel cassette PRTRC (HMM)