| Accession | TIGR03718 |
| Name | R_switched_Alx |
| Function | integral membrane protein, TerC family |
| Trusted Cutoff | 246.40 |
| Domain Trusted Cutoff | 246.40 |
| Noise Cutoff | 149.25 |
| Domain Noise Cutoff | 149.25 |
| Isology Type | subfamily |
| HMM Length | 303 |
| Gene Ontology Term | GO:0003674: molecular_function molecular_function |
| | GO:0008150: biological_process biological_process |
| | GO:0016021: integral to membrane cellular_component |
| Author | Haft DH |
| Entry Date | Mar 2 2009 12:15PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (PF03741), this subfamily contains TerC itself from Alcaligenes sp. plasmid IncHI2 pMER610 and from Proteus mirabilis. It also contains the alkaline-inducible E. coli protein Alx, which unlike the two TerC examples is preceded by a yybP-ykoY leader. |
| References | RN [1]
RM PMID:3049247
RT The nucleotide sequence of a plasmid determinant for resistance to tellurium anions.
RA Jobling MG, Ritchie DA
RL Gene. 1988 Jun 30;66(2):245-58.
RN [2]
RM PMID:12724390
RT An inducible tellurite-resistance operon in Proteus mirabilis.
RA Toptchieva A, Sisson G, Bryden LJ, Taylor DE, Hoffman PS
RL Microbiology. 2003 May;149(Pt 5):1285-95. |
