| Accession | TIGR03679 |
| Name | arCOG00187 |
| Function | arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein |
| Trusted Cutoff | 197.30 |
| Domain Trusted Cutoff | 197.30 |
| Noise Cutoff | 193.45 |
| Domain Noise Cutoff | 193.45 |
| Isology Type | equivalog |
| HMM Length | 218 |
| Author | Selengut J |
| Entry Date | Oct 27 2008 2:17PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | This protein consists of an N-terminal possible metal-binding domain (PF04068) followed by a 4Fe-4S cluster binding domain (PF00037) followed by a C-terminal ABC transporter, ATP-binding domain (PF00005). This combination of N-terminal domains is observed in the RNase L inhibitor, RLI [1].
This model has the same scope as an archaeal COG (arCOG00187) [2] and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes. |
| References | RN [1]
RM PMID: 9524254
RT cDNA cloning and expression analysis of the murine
RT ribonuclease L inhibitor.
RA Benoit De Coignac A, Bisbal C, Lebleu B, Salehzada T;
RL Gene 1998;209:149-156.
RN [2]
RM PMID:18042280
RT Clusters of orthologous genes for 41 archaeal genomes and implications for evolutionary genomics of archaea.
RA Makarova KS, Sorokin AV, Novichkov PS, Wolf YI, Koonin EV
RL Biol Direct. 2007 Nov 27;2:33. |
| Genome Property | GenProp0831: archaeal core gene set, exactly 1 per genome (HMM) |
