HMM Summary Page: TIGR03678

Functionbacteriocin leader peptide, microcyclamide/patellamide family
Trusted Cutoff39.60
Domain Trusted Cutoff39.60
Noise Cutoff28.00
Domain Noise Cutoff28.00
Isology Typesubfamily_domain
HMM Length34
AuthorHaft DH
Entry DateOct 27 2008 11:01AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis model represents a conserved N-terminal region shared by microcyclamide and patellamide bacteriocins precursors. These bacteriocin precursors are associated with heterocyclization. Related precursors are found in family TIGR04446.
ReferencesRN [1] RM PMID:18245249 RT Microcyclamide biosynthesis in two strains of Microcystis aeruginosa: from structure to genes and vice versa. RA Ziemert N, Ishida K, Quillardet P, Bouchier C, Hertweck C, de Marsac NT, Dittmann E RL Appl Environ Microbiol. 2008 Mar;74(6):1791-7.
Genome PropertyGenProp0807: bacteriocin system, heterocycle biosynthesis group (HMM)
GenProp1083: cyanobactin-like ribosomal natural product biosynthesis (HMM)