HMM Summary Page: TIGR03592

Functionmembrane protein insertase, YidC/Oxa1 family
Gene SymbolyidC
Trusted Cutoff84.30
Domain Trusted Cutoff84.30
Noise Cutoff72.05
Domain Noise Cutoff72.05
Isology Typesubfamily_domain
HMM Length191
Mainrole CategoryProtein fate
Subrole CategoryProtein and peptide secretion and trafficking
Gene Ontology TermGO:0003674: molecular_function molecular_function
GO:0031224: intrinsic to membrane cellular_component
GO:0051205: protein insertion into membrane biological_process
AuthorHaft DH
Entry DateApr 10 2008 2:49PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis model describes full-length from some species, and the C-terminal region only from other species, of the YidC/Oxa1 family of proteins. This domain appears to be univeral among bacteria (although absent from Archaea). The well-characterized YidC protein from Escherichia coli and its close homologs contain a large N-terminal periplasmic domain in addition to the region modeled here.
Genome PropertyGenProp0800: bacterial core gene set, 1 or more per genome (HMM)
GenProp0209: Sec system preprotein translocase (HMM)