HMM Summary Page: TIGR03489

FunctionCRISPR-associated protein Cas7/Csp1, subtype PGING
Gene Symbolcas7
Trusted Cutoff340.65
Domain Trusted Cutoff340.65
Noise Cutoff29.20
Domain Noise Cutoff29.20
Isology Typehypoth_equivalog
HMM Length292
AuthorHaft DH
Entry DateOct 5 2007 10:08AM
Last ModifiedFeb 14 2011 3:27PM
CommentMembers of this protein family are Csp1, a CRISPR-associated (cas) gene marker for the Pging subtype of CRISPR/cas system, as found in Porphyromonas gingivalis W83 and Bacteroides forsythus ATCC 43037. This protein belongs to the family of DevR (TIGR01875), a regulator of development in Myxococcus xanthus located in a cas gene region. A different branch of the DevR family, Cst2 (TIGR02585), is a marker for the Tneap subtype of CRISPR/cas system.
Genome PropertyGenProp0768: CRISPR system, Pging subtype (HMM)
GenProp0021: CRISPR region (HMM)