HMM Summary Page: TIGR03487

FunctionCRISPR-associated protein Cas8c/Csp2, subtype PGING
Gene Symbolcas8c
Trusted Cutoff461.75
Domain Trusted Cutoff461.75
Noise Cutoff461.45
Domain Noise Cutoff461.45
Isology Typehypoth_equivalog
HMM Length483
AuthorHaft DH
Entry DateOct 4 2007 1:17PM
Last ModifiedFeb 14 2011 3:27PM
CommentMembers of this protein family are cas, or CRISPR-associated, proteins. The two sequences in the alignment seed are found within cas gene clusters that are adjacent to CRISPR DNA repeats in two members of the order Bacteroidales, Porphyromonas gingivalis W83 and Bacteroides forsythus ATCC 43037. This cas protein family is unique to the Pging (Porphyromonas gingivalis) subtype.
Genome PropertyGenProp0768: CRISPR system, Pging subtype (HMM)
GenProp0021: CRISPR region (HMM)