HMM Summary Page: TIGR03474
| Accession | TIGR03474 |
| Name | incFII_RepA |
| Function | incFII family plasmid replication initiator RepA |
| Gene Symbol | repA |
| Trusted Cutoff | 446.90 |
| Domain Trusted Cutoff | 446.90 |
| Noise Cutoff | 58.15 |
| Domain Noise Cutoff | 58.15 |
| Isology Type | equivalog |
| HMM Length | 275 |
| Author | Haft DH |
| Entry Date | Aug 16 2007 11:33AM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | Members of this protein are the plasmid replication initiator RepA of incFII (plasmid incompatibility group F-II) plasmids. R1 and R100 are plasmids in this group. Immediately upstream of repA is found tap, a leader peptide of about 24 amino acids, often not assigned as a gene in annotated plasmid sequences. Note that other, non-homologous plasmid replication proteins share the gene symbol (repA) and similar names (plasmid replication protein RepA). |