HMM Summary Page: TIGR03474

FunctionincFII family plasmid replication initiator RepA
Gene SymbolrepA
Trusted Cutoff446.90
Domain Trusted Cutoff446.90
Noise Cutoff58.15
Domain Noise Cutoff58.15
Isology Typeequivalog
HMM Length275
AuthorHaft DH
Entry DateAug 16 2007 11:33AM
Last ModifiedFeb 14 2011 3:27PM
CommentMembers of this protein are the plasmid replication initiator RepA of incFII (plasmid incompatibility group F-II) plasmids. R1 and R100 are plasmids in this group. Immediately upstream of repA is found tap, a leader peptide of about 24 amino acids, often not assigned as a gene in annotated plasmid sequences. Note that other, non-homologous plasmid replication proteins share the gene symbol (repA) and similar names (plasmid replication protein RepA).