HMM Summary Page: TIGR03454
| Accession | TIGR03454 |
| Name | partition_RepB |
| Function | plasmid partitioning protein RepB |
| Gene Symbol | repB |
| Trusted Cutoff | 201.50 |
| Domain Trusted Cutoff | 201.50 |
| Noise Cutoff | 106.00 |
| Domain Noise Cutoff | 106.00 |
| Isology Type | equivalog |
| HMM Length | 325 |
| Mainrole Category | Mobile and extrachromosomal element functions |
| Subrole Category | Plasmid functions |
| Author | Haft DH |
| Entry Date | Dec 6 2007 1:09PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | Members of this family are the RepB protein involved in replicon partitioning. RepB is found, in general, as part of a repABC operon in plasmids and small chromosomes, separate from the main chromosome, in various bacteria. This model describes a rather narrow clade of proteins; it should be noted that additional homologs scoring below the trusted cutoff have very similar functions, although they may be named differently. |
| Genome Property | GenProp0487: repABC-type alpha-proteobacterial replicon(s) (HMM) |