HMM Summary Page: TIGR03454

Functionplasmid partitioning protein RepB
Gene SymbolrepB
Trusted Cutoff201.50
Domain Trusted Cutoff201.50
Noise Cutoff106.00
Domain Noise Cutoff106.00
Isology Typeequivalog
HMM Length325
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryPlasmid functions
AuthorHaft DH
Entry DateDec 6 2007 1:09PM
Last ModifiedFeb 14 2011 3:27PM
CommentMembers of this family are the RepB protein involved in replicon partitioning. RepB is found, in general, as part of a repABC operon in plasmids and small chromosomes, separate from the main chromosome, in various bacteria. This model describes a rather narrow clade of proteins; it should be noted that additional homologs scoring below the trusted cutoff have very similar functions, although they may be named differently.
Genome PropertyGenProp0487: repABC-type alpha-proteobacterial replicon(s) (HMM)