HMM Summary Page: TIGR03435

Functionsoil-associated protein, TIGR03435 family
Trusted Cutoff40.00
Domain Trusted Cutoff40.00
Noise Cutoff22.00
Domain Noise Cutoff22.00
Isology Typeparalog
HMM Length241
AuthorHaft DH
Entry DateJun 15 2007 1:34PM
Last ModifiedDec 8 2011 1:34PM
CommentBacterial reference strains encoding members of this protein family are all isolated from soil. These include 39 members from Solibacter usitatus Ellin6076, 27 from Acidobacterium sp. MP5ACTX8 (both Acidobacteria), and four from Pedosphaera parvula Ellin514 (Verrucomicrobia). The family is well-diversified, with few pairs showing greater than 50 % pairwise identity. A few members are fused to Peptidase_M56 domains (see PF05569), to Sigma70_r2 domains (see PF04542), or have a duplication of this domain.