HMM Summary Page: TIGR03347

Functiontype VI secretion protein, VC_A0111 family
Trusted Cutoff143.30
Domain Trusted Cutoff143.30
Noise Cutoff113.85
Domain Noise Cutoff113.85
Isology Typehypoth_equivalog
HMM Length300
Mainrole CategoryProtein fate
Subrole CategoryProtein and peptide secretion and trafficking
Gene Ontology TermGO:0008565: protein transporter activity molecular_function
GO:0033103: protein secretion by the type VI secretion system biological_process
AuthorHaft DH
Entry DateMar 14 2007 3:31PM
Last ModifiedFeb 14 2011 3:27PM
CommentWork by Mougous, et al. (2006), describes IAHP-related loci as a type VI secretion system (PMID:16763151). This protein family is associated with type VI secretion loci, although not treated explicitly by Mougous, et al.
ReferencesRN [1] RM PMID: 16763151 RT A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus. RA Mougous JD, Cuff ME, Raunser S, Shen A, Zhou M, Gifford CA, Goodman AL, Joachimiak G, Ordonez CL, Lory S, Walz T, Joachimiak A, Mekalanos JJ RL Science. 2006 Jun 9;312(5779):1526-30.
Genome PropertyGenProp0735: type VI secretion (HMM)