HMM Summary Page: TIGR03291

Functionputative methanogenesis marker protein 17
Trusted Cutoff67.10
Domain Trusted Cutoff67.10
Noise Cutoff64.80
Domain Noise Cutoff64.80
Isology Typehypoth_equivalog
HMM Length185
Mainrole CategoryEnergy metabolism
Subrole CategoryMethanogenesis
AuthorHaft DH
Entry DateJan 23 2007 1:39PM
Last ModifiedFeb 10 2012 11:31AM
CommentMembers of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
ReferencesRN [1] RM PMID:22070167 RT ProPhylo: partial phylogenetic profiling to guide protein family construction and assignment of biological process. RA Basu MK, Selengut JD, Haft DH RL BMC Bioinformatics. 2011 Nov 9;12:434.
Genome PropertyGenProp0722: methanogenesis marker set (HMM)