Accession | TIGR03271 |
Name | methan_mark_5 |
Function | putative methanogenesis marker protein 5 |
Trusted Cutoff | 140.25 |
Domain Trusted Cutoff | 140.25 |
Noise Cutoff | 43.90 |
Domain Noise Cutoff | 43.90 |
Isology Type | hypoth_equivalog |
HMM Length | 142 |
Mainrole Category | Energy metabolism |
Subrole Category | Methanogenesis |
Author | Haft DH |
Entry Date | Jan 18 2007 11:13AM |
Last Modified | Feb 10 2012 11:33AM |
Comment | Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. |
References | RN [1]
RM PMID:22070167
RT ProPhylo: partial phylogenetic profiling to guide protein family construction and assignment of biological process.
RA Basu MK, Selengut JD, Haft DH
RL BMC Bioinformatics. 2011 Nov 9;12:434. |
Genome Property | GenProp0722: methanogenesis marker set (HMM) |