| Accession | TIGR03267 |
| Name | methan_mark_2 |
| Function | putative methanogenesis marker protein 2 |
| Trusted Cutoff | 365.00 |
| Domain Trusted Cutoff | 365.00 |
| Noise Cutoff | 335.00 |
| Domain Noise Cutoff | 335.00 |
| Isology Type | hypoth_equivalog |
| HMM Length | 323 |
| Mainrole Category | Energy metabolism |
| Subrole Category | Methanogenesis |
| Author | Haft DH |
| Entry Date | Jan 17 2007 10:08AM |
| Last Modified | Feb 10 2012 11:28AM |
| Comment | A single member of this protein family is found in each of the first ten complete genome sequences of archaeal methanogens, and nowhere else. Sequence similarity to various bacterial proteins is reflected in Pfam models PF00586 and PF02769, AIR synthase related protein N-terminal and C-terminal domains, respectively. The functions of proteins in this family are unknown, but their role is likely one essential to methanogenesis. |
| References | DR PFAM; PF00586; AIRS
DR PFAM; PF02769; AIRS_C
RN [1]
RM PMID:22070167
RT ProPhylo: partial phylogenetic profiling to guide protein family construction and assignment of biological process.
RA Basu MK, Selengut JD, Haft DH
RL BMC Bioinformatics. 2011 Nov 9;12:434. |
| Genome Property | GenProp0722: methanogenesis marker set (HMM) |
