| Accession | TIGR03114 |
| Name | cas8u_csf1 |
| Function | CRISPR type AFERR-associated protein Csf1 |
| Gene Symbol | csf1 |
| Trusted Cutoff | 197.55 |
| Domain Trusted Cutoff | 197.55 |
| Noise Cutoff | 22.65 |
| Domain Noise Cutoff | 22.65 |
| Isology Type | hypoth_equivalog |
| HMM Length | 202 |
| Mainrole Category | Mobile and extrachromosomal element functions |
| Subrole Category | Other |
| Gene Ontology Term | GO:0003674: molecular_function molecular_function |
| | GO:0043571: maintenance of CRISPR repeat elements biological_process |
| Author | Haft DH |
| Entry Date | Oct 23 2006 12:49PM |
| Last Modified | Jul 23 2014 4:17PM |
| Comment | Members of this family show up near CRISPR repeats in Acidithiobacillus ferrooxidans ATCC 23270, Azoarcus sp. EbN1, and Rhodoferax ferrireducens DSM 15236. In the latter two species, the CRISPR/cas locus is found on a plasmid. This family is one of several characteristic of a type of CRISPR-associated (cas) gene cluster we designate Aferr after A. ferrooxidans, where it is both chromosomal and the only type of cas gene cluster found. The gene is designated csf1 (CRISPR/cas Subtype as in A. ferrooxidans protein 1), as it lies closest to the repeats. |
| Genome Property | GenProp0670: CRISPR system, Aferr subtype (HMM) |
| | GenProp0021: CRISPR region (HMM) |
