HMM Summary Page: TIGR03038

Functionphotosystem II reaction center protein PsbM
Gene SymbolpsbM
Trusted Cutoff35.05
Domain Trusted Cutoff35.05
Noise Cutoff35.00
Domain Noise Cutoff35.00
Isology Typeequivalog
HMM Length33
Mainrole CategoryEnergy metabolism
Subrole CategoryPhotosynthesis
Gene Ontology TermGO:0003674: molecular_function molecular_function
GO:0009538: photosystem I reaction center cellular_component
GO:0009539: photosystem II reaction center cellular_component
AuthorHaft DH
Entry DateAug 23 2006 11:41AM
Last ModifiedFeb 14 2011 3:27PM
CommentMembers of this protein family are the photosystem II reaction center M protein, product of the psbM gene, in Cyanobacteria and their derived organelles in plants. This model resembles Pfam model PF05151 but has cutoffs set to avoid false-positive matches to similar (not necessarily homologous) sequences in species that are not photosynthetic.
ReferencesDR PFAM; PF05151; Photosystem II reaction centre M protein (PsbM) DR HAMAP; MF_00438; 130 of 131
Genome PropertyGenProp0661: photosystem II (HMM)