HMM Summary Page: TIGR03020

Functiontranscriptional regulator EpsA
Gene SymbolepsA
Trusted Cutoff223.30
Domain Trusted Cutoff223.30
Noise Cutoff122.90
Domain Noise Cutoff122.90
Isology Typeequivalog
HMM Length247
AuthorSelengut J
Entry DateJul 26 2006 10:58AM
Last ModifiedFeb 14 2011 3:27PM
CommentProteins in this family include a C-terminal LuxR transcriptional regulator domain (PF00196). These proteins are positioned proximal to either EpsH-containing exopolysaccharide biosynthesis operons of the Methylobacillus type [1], or the associated PEP-CTERM-containing genes [2].
ReferencesRN [1] RM 12624205 RA Yoshida T, Ayabe Y, Yasunaga M, Usami Y, Habe H, Nojiri H, Omori T RT Genes involved in the synthesis of the exopolysaccharide methanolan by the obligate methylotroph Methylobacillus sp strain 12S. RL Microbiology. 2003 Feb;149(Pt 2):431-44. RN [2] RA Haft DH, Paulsen IT, Ward N, Selengut JD RT Exopolysaccharide-associated protein sorting in environmental organisms by the PEP-CTERM/EpsH system: application of a novel phylogenetic profiling heuristic. RL BMC Biol., in press, 2006
Genome PropertyGenProp0655: exopolysaccharide biosynthesis, exosortase B-associated (HMM)