| Accession | TIGR03006 |
| Name | pepcterm_polyde |
| Function | polysaccharide deacetylase family protein, PEP-CTERM locus subfamily |
| Trusted Cutoff | 276.20 |
| Domain Trusted Cutoff | 276.20 |
| Noise Cutoff | 147.10 |
| Domain Noise Cutoff | 147.10 |
| Isology Type | subfamily |
| HMM Length | 272 |
| Mainrole Category | Cell envelope |
| Subrole Category | Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides |
| Author | Haft DH |
| Entry Date | Jul 17 2006 10:33AM |
| Last Modified | Jun 1 2011 8:55PM |
| Comment | Members of this protein family belong to the family of polysaccharide deacetylases (PF01522). All are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria, and are found near the epsH homolog that is the putative exosortase gene. The highest scoring homologs below the trusted cutoff for this model are found in several species of Methanosarcina, an archaeal genus. |
| References | RN [1]
RA Haft DH, Paulsen IT, Ward N, Selengut JD
RT Exopolysaccharide-associated protein sorting in environmental organisms by the PEP-CTERM/EpsH system: application of a novel phylogenetic profiling heuristic.
RL BMC Biol., in press, 2006 |
| Genome Property | GenProp0652: exopolysaccharide biosynthesis, exosortase A-associated (HMM) |
