HMM Summary Page: TIGR02896

Functionstage III sporulation protein AF
Gene SymbolspoIIIAF
Trusted Cutoff61.30
Domain Trusted Cutoff61.30
Noise Cutoff39.20
Domain Noise Cutoff39.20
Isology Typeequivalog
HMM Length106
Mainrole CategoryCellular processes
Subrole CategorySporulation and germination
Gene Ontology TermGO:0003674: molecular_function molecular_function
GO:0016021: integral to membrane cellular_component
GO:0030436: asexual sporulation biological_process
AuthorHaft DH
Entry DateMar 15 2006 5:12PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis family represents the stage III sporulation protein AF of the bacterial endospore formation program, which exists in some but not all members of the Firmicutes (formerly called low-GC Gram-positives). The C-terminal region of this protein is poorly conserved, so only the N-terminal region, which includes two predicted transmembrane domains, is included in the seed alignment.
Genome PropertyGenProp0610: endospore formation marker gene set (HMM)