HMM Summary Page: TIGR02746
| Accession | TIGR02746 |
| Name | TraC-F-type |
| Function | type-IV secretion system protein TraC |
| Gene Symbol | traC |
| Trusted Cutoff | 567.05 |
| Domain Trusted Cutoff | 567.05 |
| Noise Cutoff | 286.55 |
| Domain Noise Cutoff | 286.55 |
| Isology Type | equivalog |
| HMM Length | 800 |
| Author | Selengut J |
| Entry Date | Dec 19 2005 2:19PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | The protein family described here is common among the F, P and I-like type IV secretion systems. Gene symbols include TraC (F-type), TrbE/VirB4 (P-type) and TraU (I-type). The protein conyains the Walker A and B motifs and so is a putative nucleotide triphosphatase. |
| References | RN [1] RM PMID: 12855161 RA Lawley TD, Klimke WA, Gubbins MJ, Frost LS. RT F factor conjugation is a true type IV secretion system. RL FEMS Microbiol Lett. 2003 Jul 15;224(1):1-15. RN [2] RM PMID: 12855161 RA Lawley TD, Klimke WA, Gubbins MJ, Frost LS. RT F factor conjugation is a true type IV secretion system. RL FEMS Microbiol Lett. 2003 Jul 15;224(1):1-15. RN [3] RM PMID: 16138100 RA Frost LS, Leplae R, Summers AO, Toussaint A. RT Mobile genetic elements: the agents of open source evolution. RL Nat Rev Microbiol. 2005 Sep;3(9):722-32. |
| Genome Property | GenProp0485: F and P-type conjugation systems (type IV secretion), common components (HMM) |