| Accession | TIGR02671 |
| Name | cas_csx9 |
| Function | CRISPR-associated protein Cas8a2/Csx9, subtype I-A/APERN |
| Gene Symbol | cas8a2 |
| Trusted Cutoff | 156.65 |
| Domain Trusted Cutoff | 156.65 |
| Noise Cutoff | 156.05 |
| Domain Noise Cutoff | 156.05 |
| Isology Type | equivalog |
| HMM Length | 377 |
| Mainrole Category | Mobile and extrachromosomal element functions |
| Subrole Category | Other |
| Gene Ontology Term | GO:0003674: molecular_function molecular_function |
| | GO:0043571: maintenance of CRISPR repeat elements biological_process |
| Author | Haft DH |
| Entry Date | Sep 29 2005 4:41PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | Members of this family, so far, are archaeal proteins found in CRISPR-associated (cas) gene regions. So far, this rare cas protein is found in only three genomes: Pyrococcus horikoshii shinkaj OT3, Pyrococcus abyssi GE5, and Thermococcus kodakarensis KOD1. In each case it is found immediately upstream of cas3 in loci that resemble the Apern type but lack Csa1 and Csa4 genes. |
| References | DR URL http://www.tigr.org/tigr-scripts/CMR2/genome_property_def.spl?prop=2003
RN [1]
RT A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/cas subtypes exist in prokaryotic genomes
RA Haft DH, Selengut JD, Mongodin EF, Nelsen KE
RL PLOS Comput. Biol. 1(6), e60-e69, 2005 |
| Genome Property | GenProp0319: CRISPR system, I-A/Apern subtype (HMM) |
| | GenProp0021: CRISPR region (HMM) |
