HMM Summary Page: TIGR02621

FunctionCRISPR-associated helicase Cas3, subtype Dpsyc
Gene Symbolcas3
Trusted Cutoff218.25
Domain Trusted Cutoff218.25
Noise Cutoff66.75
Domain Noise Cutoff66.75
Isology Typeexception
EC Number3.6.4.-
HMM Length864
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryOther
Gene Ontology TermGO:0004386: helicase activity molecular_function
GO:0043571: maintenance of CRISPR repeat elements biological_process
AuthorHaft DH
Entry DateJul 18 2005 10:54PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.
ReferencesDR URL RN [1] RT A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/cas subtypes exist in prokaryotic genomes RA Haft DH, Selengut JD, Mongodin EF, Nelsen KE RL PLOS Comput. Biol. 1(6), e60-e69, 2005
Genome PropertyGenProp0021: CRISPR region (HMM)
GenProp0469: CRISPR system, Dpsyc subtype (HMM)