HMM Summary Page: TIGR02608

Functiondelta-60 repeat domain
Trusted Cutoff76.50
Domain Trusted Cutoff14.00
Noise Cutoff67.00
Domain Noise Cutoff8.00
Isology Typedomain
HMM Length55
AuthorHaft DH
Entry DateJun 21 2005 1:19PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.