Accession | TIGR02570 |
Name | cas7_GSU0053 |
Function | CRISPR-associated protein GSU0053/csb1, Dpsyc system |
Gene Symbol | csb1 |
Trusted Cutoff | 38.00 |
Domain Trusted Cutoff | 38.00 |
Noise Cutoff | 35.00 |
Domain Noise Cutoff | 35.00 |
Isology Type | equivalog_domain |
HMM Length | 178 |
Mainrole Category | Mobile and extrachromosomal element functions |
Subrole Category | Other |
Gene Ontology Term | GO:0003674: molecular_function molecular_function |
| GO:0043571: maintenance of CRISPR repeat elements biological_process |
Author | Haft DH |
Entry Date | May 2 2005 11:28AM |
Last Modified | Jul 23 2014 10:49AM |
Comment | Members of this family are found in association with CRISPR repeats and other CRISPR-associated (cas) genes in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria). This CRISPR/Cas type is designated Dpsych. |
References | RN [1]
RT A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/cas subtypes exist in prokaryotic genomes
RA Haft DH, Selengut JD, Mongodin EF, Nelsen KE
RL PLOS Comput. Biol. 1(6), e60-e69, 2005 |
Genome Property | GenProp0469: CRISPR system, Dpsyc subtype (HMM) |
| GenProp0021: CRISPR region (HMM) |