HMM Summary Page: TIGR02565

FunctionCRISPR type I-F/YPEST-associated protein Csy2
Gene Symbolcsy2
Trusted Cutoff154.10
Domain Trusted Cutoff154.10
Noise Cutoff30.95
Domain Noise Cutoff30.95
Isology Typeequivalog
HMM Length296
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryOther
Gene Ontology TermGO:0003674: molecular_function molecular_function
GO:0043571: maintenance of CRISPR repeat elements biological_process
AuthorHaft DH
Entry DateApr 26 2005 11:00AM
Last ModifiedFeb 14 2011 3:27PM
CommentCRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. This family is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.
ReferencesDR URL DR URL RN [1] RT A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/cas subtypes exist in prokaryotic genomes RA Haft DH, Selengut JD, Mongodin EF, Nelsen KE RL PLOS Comput. Biol. 1(6), e60-e69, 2005
Genome PropertyGenProp0310: CRISPR system, I-F/Ypest subtype (HMM)
GenProp0021: CRISPR region (HMM)