HMM Summary Page: TIGR02549

FunctionCRISPR-associated DxTHG motif protein
Trusted Cutoff15.10
Domain Trusted Cutoff15.10
Noise Cutoff14.70
Domain Noise Cutoff14.70
Isology Typedomain
HMM Length21
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryOther
Gene Ontology TermGO:0003674: molecular_function molecular_function
GO:0043571: maintenance of CRISPR repeat elements biological_process
AuthorHaft DH
Entry DateApr 15 2005 5:32PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis model describes a short region highly conserved between two otherwise substantially different CRISPR-associated (cas) proteins, TIGR02221 and TIGR01987. This region includes the motif [VIL]-D-x-[ST]-H-[GS].
ReferencesDR URL RN [1] RT A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/cas subtypes exist in prokaryotic genomes RA Haft DH, Selengut JD, Mongodin EF, Nelsen KE RL PLOS Comput. Biol. 1(6), e60-e69, 2005