HMM Summary Page: TIGR02499

Functiontype III secretion apparatus protein, HrpE/YscL family
Trusted Cutoff78.70
Domain Trusted Cutoff78.70
Noise Cutoff75.10
Domain Noise Cutoff75.10
Isology Typeequivalog
HMM Length166
Mainrole CategoryProtein fate
Subrole CategoryProtein and peptide secretion and trafficking
Gene Ontology TermGO:0009405: pathogenesis biological_process
GO:0030254: protein secretion by the type III secretion system biological_process
GO:0030257: type III protein secretion system complex cellular_component
AuthorHaft DH
Entry DateMar 2 2005 3:06PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis model is related to Pfam model PF06188, but is broader. PF06188 describes HrpE-like proteins, components of bacterial type III secretion systems primarily in bacteria that infect plants. This model includes also the homologous proteins of animal pathogens, such as YscL of Yersinia pestis. This model excludes the related protein FliH of the bacterial flagellar apparatus (see PF02108)
ReferencesDR PFAM; PF06188; HrpE protein DR PFAMl PF02108; Flagellar assembly protein FliH
Genome PropertyGenProp0052: type III secretion (HMM)