HMM Summary Page: TIGR02474

Functionpectate lyase
Gene SymbolpelA
Trusted Cutoff189.80
Domain Trusted Cutoff189.80
Noise Cutoff31.80
Domain Noise Cutoff31.80
Isology Typeequivalog
EC Number4.2.2.2
HMM Length295
Mainrole CategoryEnergy metabolism
Subrole CategoryBiosynthesis and degradation of polysaccharides
Gene Ontology TermGO:0030570: pectate lyase activity molecular_function
GO:0045490: pectin catabolic process biological_process
AuthorHaft DH
Entry DateFeb 15 2005 5:08PM
Last ModifiedFeb 14 2011 3:27PM
CommentMembers of this family are isozymes of pectate lyase (EC, also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.
ReferencesRN [1] RM 10691990 RT Nucleotide and amino-acid sequences of a new-type pectate lyase from an alkaliphilic strain of Bacillus. RA Sawada K, Ogawa A, Ozawa T, Sumitomo N, Hatada Y, Kobayashi T, Ito S. RL Eur J Biochem. 2000 Mar;267(5):1510-5. RN [2] RM 10198006 RT Azospirillum irakense produces a novel type of pectate lyase. RA Bekri MA, Desair J, Keijers V, Proost P, Searle-van Leeuwen M, Vanderleyden J, Vande Broek A. RL J Bacteriol. 1999 Apr;181(8):2440-7.