| Accession | TIGR02424 |
| Name | TF_pcaQ |
| Function | pca operon transcription factor PcaQ |
| Gene Symbol | pcaQ |
| Trusted Cutoff | 303.80 |
| Domain Trusted Cutoff | 303.80 |
| Noise Cutoff | 302.40 |
| Domain Noise Cutoff | 302.40 |
| Isology Type | equivalog |
| HMM Length | 300 |
| Mainrole Category | Energy metabolism |
| Subrole Category | Other |
| Gene Ontology Term | GO:0016563: transcription activator activity molecular_function |
| | GO:0019619: protocatechuate catabolic process biological_process |
| | GO:0045893: positive regulation of transcription, DNA-dependent biological_process |
| Author | Haft DH |
| Entry Date | Jan 10 2005 5:36PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | Members of this family are LysR-family transcription factors associated with operons for catabolism of protocatechuate. Members occur only in Proteobacteria. |
| References | RN [1]
RM 15006791
RT Diverse organization of genes of the beta-ketoadipate pathway in members of the marine Roseobacter lineage.
RA Buchan A, Neidle EL, Moran MA.
RL Appl Environ Microbiol. 2004 Mar;70(3):1658-68. |
| Genome Property | GenProp0273: protocatechuate degradation to beta-ketoadipate (HMM) |
