HMM Summary Page: TIGR02419

Functionphage/conjugal plasmid C-4 type zinc finger protein, TraR family
Trusted Cutoff59.70
Domain Trusted Cutoff59.70
Noise Cutoff46.50
Domain Noise Cutoff46.50
Isology Typesubfamily
HMM Length64
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryProphage functions
AuthorHaft DH
Entry DateJan 4 2005 3:07PM
Last ModifiedFeb 14 2011 3:27PM
CommentMembers of this family are putative C4-type zinc finger proteins found almost exclusively in prophage regions, actual phage, or conjugal transfer regions of the Proteobactia. This small protein (about 70 amino acids) appears homologous to but is smaller than DksA (DnaK suppressor protein), found to be critical for regulating transcription of ribosomal RNA.