HMM Summary Page: TIGR02219

Functionputative phage cell wall peptidase, NlpC/P60 family
Trusted Cutoff81.90
Domain Trusted Cutoff81.90
Noise Cutoff62.25
Domain Noise Cutoff62.25
Isology Typehypoth_equivalog
HMM Length134
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryProphage functions
AuthorHaft DH
Entry DateJun 1 2004 11:54AM
Last ModifiedFeb 14 2011 3:27PM
CommentMembers of this family show sequence similarity to members of the NlpC/P60 family described by Pfam model PF00877 and by Anantharaman and Aravind (PMID:12620121). The NlpC/P60 family includes a number of characterized bacterial cell wall hydrolases. Members of this related family are all found in prophage regions of bacterial genomes.
ReferencesDR PFAM; PF00877; NlpC/P60 family RM 12620121 RT Evolutionary history, structural features and biochemical diversity of the NlpC/P60 superfamily of enzymes. RA Anantharaman V, Aravind L. RL Genome Biol. 2003;4(2):R11