HMM Summary Page: TIGR02218

Functionphage conserved hypothetical protein BR0599
Trusted Cutoff80.50
Domain Trusted Cutoff80.50
Noise Cutoff53.85
Domain Noise Cutoff53.85
Isology Typesubfamily
HMM Length266
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryProphage functions
AuthorHaft DH
Entry DateJun 1 2004 10:57AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM describes a family of proteins found almost exclusively in phage or in prophage regions of bacterial genomes, including the phage-like Rhodobacter capsulatus gene transfer agent, which packages DNA. An apparent exception is Wolbachia pipientis wMel, a bacterial endosymbiont of the fruit fly, which has several candidate phage-related genes physically separate from obvious prophage regions.