| Accession | TIGR02151 |
| Name | IPP_isom_2 |
| Function | isopentenyl-diphosphate delta-isomerase, type 2 |
| Gene Symbol | fni |
| Trusted Cutoff | 281.30 |
| Domain Trusted Cutoff | 281.30 |
| Noise Cutoff | 153.70 |
| Domain Noise Cutoff | 153.70 |
| Isology Type | equivalog |
| EC Number | 5.3.3.2 |
| HMM Length | 338 |
| Mainrole Category | Biosynthesis of cofactors, prosthetic groups, and carriers |
| Subrole Category | Other |
| Gene Ontology Term | GO:0004452: isopentenyl-diphosphate delta-isomerase activity molecular_function |
| | GO:0008299: isoprenoid biosynthetic process biological_process |
| Author | Haft DH |
| Entry Date | Mar 15 2004 10:47PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | Isopentenyl-diphosphate delta-isomerase (IPP isomerase) interconverts isopentenyl diphosphate and dimethylallyl diphosphate. This HMM represents the type 2 enzyme. FMN, NADPH, and Mg2+ are required by this form, which lacks homology to the type 1 enzyme (TIGR02150). IPP is precursor to many compounds, including enzyme cofactors, sterols, and isoprenoids. |
| References | DR EXPERIMENTAL; SP|P58052; Staphylococcus aureus
DR EXPERIMENTAL; SP|Q9KWG2; Streptomyces sp. CL190
DR EXPERIMENTAL; SP|O26154; Methanobacterium thermoautotrophicum
RM 14745175
RT Bacillus subtilis ypgA gene is fni, a nonessential gene encoding type 2 isopentenyl diphosphate isomerase.
RA Takagi M, Kaneda K, Shimizu T, Hayakawa Y, Seto H, Kuzuyama T.
RL Biosci Biotechnol Biochem. 2004 Jan;68(1):132-7.
DR HAMAP; MF_00354; 127 of 127 |
| Genome Property | GenProp0758: lycopene biosynthesis from IPP (HMM) |
