HMM Summary Page: TIGR02145

Functionfibrobacter succinogenes major paralogous domain
Trusted Cutoff41.65
Domain Trusted Cutoff41.65
Noise Cutoff21.00
Domain Noise Cutoff21.00
Isology Typedomain
HMM Length176
Mainrole CategoryCell envelope
Subrole CategoryOther
AuthorHaft DH
Entry DateMar 11 2004 11:15AM
Last ModifiedMar 1 2011 11:50AM
CommentThis domain of about 175 to 200 amino acids is found, in from one to five copies, in over 50 proteins in Fibrobacter succinogenes S85, an obligate anaerobe of the rumen. Many members of this family have an apparent lipoprotein signal sequence. Conserved cysteine residues, suggestive of disulfide bond formation, are also consistent with an extracytoplasmic location for this domain. This domain can also be found in small numbers of proteins in Chlorobium tepidum and Bacteroides thetaiotaomicron.