| Accession | TIGR02121 |
| Name | Na_Pro_sym |
| Function | sodium/proline symporter |
| Gene Symbol | putP |
| Trusted Cutoff | 515.50 |
| Domain Trusted Cutoff | 515.50 |
| Noise Cutoff | 260.75 |
| Domain Noise Cutoff | 260.75 |
| Isology Type | equivalog |
| HMM Length | 488 |
| Mainrole Category | Transport and binding proteins |
| Subrole Category | Amino acids, peptides and amines |
| Gene Ontology Term | GO:0005298: proline:sodium symporter activity molecular_function |
| | GO:0015824: proline transport biological_process |
| | GO:0016020: membrane cellular_component |
| Author | Haft DH |
| Entry Date | Feb 10 2004 4:23PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | This family consists of the sodium/proline symporter (proline permease) from a number of Gram-negative and Gram-positive bacteria and from the archaeal genus Methanosarcina. Using the related pantothenate permease as an outgroup, candidate sequences from Bifidobacterium longum and several from archaea are found to be outside the clade defined by known proline permeases. These sequences, scoring between 570 and -40, define the range between trusted and noise cutoff scores. |
