HMM Summary Page: TIGR02097

Functionhemimethylated DNA binding domain
Trusted Cutoff38.05
Domain Trusted Cutoff38.05
Noise Cutoff23.10
Domain Noise Cutoff23.10
Isology Typedomain
HMM Length101
AuthorHaft DH
Entry DateJan 13 2004 2:59PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM describes the small protein from E. coli YccV and its homologs in other Proteobacteria. YccV is now described as a hemimethylated DNA binding protein. The model also describes a domain in longer eukaryotic proteins.
ReferencesRM 12700277 RT Isolation of a new hemimethylated DNA binding protein which regulates dnaA gene expression. RA d'Alencon E, Taghbalout A, Bristow C, Kern R, Aflalo R, Kohiyama M. RL J Bacteriol. ; 185(9): 2967-71. DR HAMAP; MF_01194; 35 of 36