HMM Summary Page: TIGR02036

FunctionD-serine deaminase transcriptional activator
Gene SymboldsdC
Trusted Cutoff352.40
Domain Trusted Cutoff352.40
Noise Cutoff258.45
Domain Noise Cutoff258.45
Isology Typeequivalog
HMM Length302
Mainrole CategoryRegulatory functions
Subrole CategoryDNA interactions
Gene Ontology TermGO:0003677: DNA binding molecular_function
GO:0003700: sequence-specific DNA binding transcription factor activity molecular_function
GO:0005737: cytoplasm cellular_component
GO:0006355: regulation of transcription, DNA-dependent biological_process
GO:0009063: cellular amino acid catabolic process biological_process
AuthorHaft DH
Entry DateOct 23 2003 1:23PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis family, part of the LysR family of transcriptional regulators, activates transcription of the gene for D-serine deaminase, dsdA. Trusted members of this family so far are found adjacent to dsdA and only in Gammaproteobacteria, including E. coli, Vibrio cholerae, and Colwellia psychrerythraea.