HMM Summary Page: TIGR02003

FunctionPTS system, IIBC component
Trusted Cutoff649.85
Domain Trusted Cutoff649.85
Noise Cutoff442.35
Domain Noise Cutoff442.35
Isology Typehypoth_equivalog_domain
EC Number2.7.1.69
HMM Length547
Mainrole CategoryTransport and binding proteins
Subrole CategoryCarbohydrates, organic alcohols, and acids
Gene Ontology TermGO:0015144: carbohydrate transmembrane transporter activity molecular_function
AuthorSelengut J
Entry DateSep 30 2003 11:22AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM represents a family of fused B and C components of PTS enzyme II. This clade is a member of a larger family which contains enzyme II's specific for a variety of sugars including glucose (TIGR02002) and N-acetylglucosamine (TIGR01998). None of the members of this clade have been experimentally characterized. This clade includes sequences from Streptococcus and Enterococcus which also include a C-terminal A domain as well as Bacillus and Clostridium which do not. In nearly all cases, these species also contain an authentic glucose-specific PTS transporter.
Genome PropertyGenProp0119: PTS transport system (HMM)
GenProp0119: PTS transport system (HMM)