HMM Summary Page: TIGR01985
| Accession | TIGR01985 |
| Name | phasin_2 |
| Function | phasin |
| Trusted Cutoff | 99.70 |
| Domain Trusted Cutoff | 99.70 |
| Noise Cutoff | 76.65 |
| Domain Noise Cutoff | 76.65 |
| Isology Type | equivalog |
| HMM Length | 123 |
| Author | Selengut J |
| Entry Date | Sep 15 2003 3:41PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | This HMM represents a family of granule-associate proteins (phasins) which are part of the polyhydroxyalkanoate synthesis machinery. This family is based on a pair of characterized genes from Methylobacterium extorquens. Members of the seed for this model all contain the rest of the components believed to be essential for this system (see the "polyhydroxyalkanoic acid synthesis" property in the GenPropDB). Members of this family score below trusted to another phasin model, TIGR01841 and together may represent a subfamily or broader equivalog. |
| References | CC RN [1] RM PMID: 12399487 RT Poly-beta-hydroxybutyrate biosynthesis in the facultative methylotroph methylobacterium extorquens AM1: identification and mutation of gap11, gap20, and phaR. RA Korotkova N, Chistoserdova L, Lidstrom ME. RL J Bacteriol. 2002 Nov;184(22):6174-81. |
| Genome Property | GenProp0055: polyhydroxyalkanoic acids (HMM) |