HMM Summary Page: TIGR01952

FunctionNusA family KH domain protein, archaeal
Trusted Cutoff74.35
Domain Trusted Cutoff74.35
Noise Cutoff58.30
Domain Noise Cutoff58.30
Isology Typehypoth_equivalog
HMM Length141
AuthorHaft DH
Entry DateJul 28 2003 9:53AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM represents a family of archaeal proteins found in a single copy per genome. It contains two KH domains (PF00013) and is most closely related to the central region bacterial NusA, a transcription termination factor named for its iteraction with phage lambda protein N in E. coli. The proteins required for antitermination by N include NusA, NusB, nusE (ribosomal protein S10), and nusG. This system, on the whole, appears not to be present in the Archaea.