HMM Summary Page: TIGR01952
Accession | TIGR01952 |
Name | nusA_arch |
Function | NusA family KH domain protein, archaeal |
Trusted Cutoff | 74.35 |
Domain Trusted Cutoff | 74.35 |
Noise Cutoff | 58.30 |
Domain Noise Cutoff | 58.30 |
Isology Type | hypoth_equivalog |
HMM Length | 141 |
Author | Haft DH |
Entry Date | Jul 28 2003 9:53AM |
Last Modified | Feb 14 2011 3:27PM |
Comment | This HMM represents a family of archaeal proteins found in a single copy per genome. It contains two KH domains (PF00013) and is most closely related to the central region bacterial NusA, a transcription termination factor named for its iteraction with phage lambda protein N in E. coli. The proteins required for antitermination by N include NusA, NusB, nusE (ribosomal protein S10), and nusG. This system, on the whole, appears not to be present in the Archaea. |