| Accession | TIGR01908 |
| Name | cas_CXXC_CXXC |
| Function | CRISPR-associated protein Cas8b1/Cst1, subtype I-B/TNEAP |
| Gene Symbol | cas8a1 |
| Trusted Cutoff | 19.40 |
| Domain Trusted Cutoff | 19.40 |
| Noise Cutoff | 16.85 |
| Domain Noise Cutoff | 16.85 |
| Isology Type | equivalog_domain |
| HMM Length | 308 |
| Mainrole Category | Mobile and extrachromosomal element functions |
| Subrole Category | Other |
| Gene Ontology Term | GO:0003674: molecular_function molecular_function |
| | GO:0043571: maintenance of CRISPR repeat elements biological_process |
| Author | Haft DH |
| Entry Date | May 8 2003 4:42PM |
| Last Modified | Jul 23 2014 4:06PM |
| Comment | CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This (revised) HMM describes a conserved region from an otherwise highly divergent protein found in the Tneap subtype of CRISPR/Cas regions. This Cys-rich region features two motifs of CXXC. |
| References | DR URL http://www.tigr.org/tigr-scripts/CMR2/genome_property_def.spl?prop=2003
DR URL http://www.tigr.org/tigr-scripts/CMR2/genome_property_def.spl?prop=57304
RN [1]
RT A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/cas subtypes exist in prokaryotic genomes
RA Haft DH, Selengut JD, Mongodin EF, Nelsen KE
RL PLOS Comput. Biol. 1(6), e60-e69, 2005 |
| Genome Property | GenProp0317: CRISPR system, I-B subtype, Tneap branch (HMM) |
| | GenProp0021: CRISPR region (HMM) |
