| Accession | TIGR01866 |
| Name | cas_Csn2 |
| Function | CRISPR type II-A/NMEMI-associated protein Csn2 |
| Gene Symbol | csn2 |
| Trusted Cutoff | 35.00 |
| Domain Trusted Cutoff | 35.00 |
| Noise Cutoff | 25.00 |
| Domain Noise Cutoff | 25.00 |
| Isology Type | equivalog |
| HMM Length | 222 |
| Mainrole Category | Mobile and extrachromosomal element functions |
| Subrole Category | Other |
| Gene Ontology Term | GO:0003674: molecular_function molecular_function |
| | GO:0043571: maintenance of CRISPR repeat elements biological_process |
| Author | Haft DH |
| Entry Date | Apr 3 2003 2:35PM |
| Last Modified | Feb 14 2011 3:27PM |
| Comment | CRISPR loci appear to be mobile elements with a wide host range. This HMM represents a protein found only in CRISPR-containing species, near other CRISPR-associated proteins (cas), as part of the NMENI subtype of CRISPR/Cas loci. The species range so far for this subtype is animal pathogens and commensals only. This protein is present in some but not all NMENI CRISPR/Cas loci. |
| References | DR URL http://www.tigr.org/tigr-scripts/CMR2/genome_property_def.spl?prop=2003
DR URL http://www.tigr.org/tigr-scripts/CMR2/genome_property_def.spl?prop=57301
RN [1]
RT A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/cas subtypes exist in prokaryotic genomes
RA Haft DH, Selengut JD, Mongodin EF, Nelsen KE
RL PLOS Comput. Biol. 1(6), e60-e69, 2005 |
| Genome Property | GenProp0314: CRISPR system, II/Nmeni subtype (HMM) |
| | GenProp0021: CRISPR region (HMM) |
